tigger
Immcantation Portal
About
Introduction
TIgGER
Core Abilities
Required Input
Contact
Dependencies
Authors
Citing
License
Download & Installation
Download
Installing Released Versions
Building Development Versions
Package Overview
Description
Details
Allele detection and genotyping
Mutation handling
Input, output and formatting
References
Release Notes
Version 1.1.0: October 10, 2023
Version 1.0.1: September 19, 2022
Version 1.0.0: May 12, 2020
Version 0.4.0 July 18, 2019
Version 0.3.1 October 19, 2018
Version 0.3.0 October 3, 2018
Version 0.2.11 September 21, 2017
Version 0.2.10 July 1, 2017
Version 0.2.9.999 May 16, 2017
Version 0.2.9: March 24, 2017
Version 0.2.8: August 26, 2016
Version 0.2.7: July 24, 2016
Version 0.2.6: July 01, 2016
Version 0.2.5.999: June 10, 2016
Version 0.2.5: June 07, 2016
Related Projects
Vignettes
Polymorphism detection and genotyping
Introduction
Input
Novel allele detection
Inferring genotypes
Correcting allele calls
Evidence
References
Help Topics
Allele detection and genotyping
findNovelAlleles
selectNovel
inferGenotype
inferGenotypeBayesian
genotypeFasta
reassignAlleles
generateEvidence
plotNovel
plotGenotype
Mutation handling
getMutatedPositions
getMutCount
getPopularMutationCount
findUnmutatedCalls
insertPolymorphisms
File I/O and formatting
readIgFasta
writeFasta
cleanSeqs
sortAlleles
subsampleDb
updateAlleleNames
Data
AIRRDb
GermlineIGHV
SampleGermlineIGHV
SampleDb
SampleGenotype
SampleNovel
tigger
»
404
Page not found
BitBucket